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Mango pangenome reveals dramatic impacts of reference bias on population genomic analyses.

Ahmad B, Su Y, Hao Y, Razzaq T, Arshad R, Zhang Y, Zhang Y, Wang X, Huang G, Su X, Hou T, Li C, Yang X, Li C, Chu Z, Wang Q, Zhang Y, Jin Z, Xu Q, Xu X, Peng Y, Bi G, Chen C, Chen Y, Xiao H, Huang J, Zhou Y, Tian X

Most genomic studies start by mapping sequencing data to a reference genome. The quality of reference genome assembly, genetic relatedness to the studied population, and the mapping method employed di